ASSISTANCE REQUIRED] Pokemon Y Randomizer as CIA/3DS

I've been at this all day, and can't wait to get it done! I am trying to make a randomized Pokemon Y CIA/3DS and well, this is embarrassing I can't quite figure out how to rebuild it as a

pk3DS: Pokémon 3DS ROM Editor and Randomizer - Page 70 - ROM - 3DS

ASSISTANCE REQUIRED] Pokemon Y Randomizer as CIA/3DS

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Need help converting a randomize pokemon Y 3ds file into a cia